Rick Wicklin, PhD, is a distinguished researcher in computational statistics at SAS and is a principal developer of SAS/IML software. His areas of expertise include computational statistics, simulation, statistical graphics, and modern methods in statistical data analysis. Rick is author of the books Statistical Programming with SAS/IML Software and Simulating Data with SAS.
In a previous article, I discussed the lines plot for multiple comparisons of means. Another graph that is frequently used for multiple comparisons is the diffogram, which indicates whether the pairwise differences between means of groups are statistically significant. This article discusses how to interpret a diffogram. Two related plots
Last week Warren Kuhfeld wrote about a graph called the "lines plot" that is produced by SAS/STAT procedures in SAS 9.4M5. (Notice that the "lines plot" has an 's'; it is not a line plot!) The lines plot is produced as part of an analysis that performs multiple comparisons of
The article "Fisher's transformation of the correlation coefficient" featured a Monte Carlo simulation that generated sample correlations from bivariate normal data. The simulation used three steps: Simulate B samples of size N from a bivariate normal distribution with correlation ρ. Use PROC CORR to compute the sample correlation matrix for
Correlations between variables are typically displayed in a matrix. Because the correlation matrix is determined by the order of the variables, it is difficult to find the largest and smallest correlations, which is why analysts sometimes use colors to visualize the correlation matrix. Another visualization option is the pairwise correlation
If you perform a weighted statistical analysis, it can be useful to produce a statistical graph that also incorporates the weights. This article shows how to construct and interpret a weighted histogram in SAS. How to construct a weighted histogram Before constructing a weighted histogram, let's review the construction of
How can you specify weights for a statistical analysis? Hmmm, that's a "weighty" question! Many people on discussion forums ask "What is a weight variable?" and "How do you choose a weight for each observation?" This article gives a brief overview of weight variables in statistics and includes examples of
In a large simulation study, it can be convenient to have a "control file" that contains the parameters for the study. My recent article about how to simulate multivariate normal clusters demonstrates a simple example of this technique. The simulation in that article uses an input data set that contains
My article about Fisher's transformation of the Pearson correlation contained a simulation. The simulation uses the RANDNORMAL function in SAS/IML software to simulate multivariate normal data. If you are a SAS programmer who does not have access to SAS/IML software, you can use the SIMNORMAL procedure in SAS/STAT software to
Pearson's correlation measures the linear association between two variables. Because the correlation is bounded between [-1, 1], the sampling distribution for highly correlated variables is highly skewed. Even for bivariate normal data, the skewness makes it challenging to estimate confidence intervals for the correlation, to run one-sample hypothesis tests ("Is
Toe bone connected to the foot bone, Foot bone connected to the leg bone, Leg bone connected to the knee bone,... — American Spiritual, "Dem Bones" Last week I read an interesting article on Robert Kosara's data visualization blog. Kosara connected the geographic centers of the US zip codes in
This article shows how to simulate data from a mixture of multivariate normal distributions, which is also called a Gaussian mixture. You can use this simulation to generate clustered data. The adjacent graph shows three clusters, each simulated from a four-dimensional normal distribution. Each cluster has its own within-cluster covariance,
Did you know that you can get SAS to compute symbolic (analytical) derivatives of simple functions, including applying the product rule, quotient rule, and chain rule? SAS can form the symbolic derivatives of single-variable functions and partial derivatives of multivariable functions. Furthermore, the derivatives are output in a form that
If you use SAS regression procedures, you are probably familiar with the "stars and bars" notation, which enables you to construct interaction effects in regression models. Although you can construct many regression models by using that classical notation, a friend recently reminded me that the EFFECT statement in SAS provides
Correlation is a fundamental statistical concept that measures the linear association between two variables. There are multiple ways to think about correlation: geometrically, algebraically, with matrices, with vectors, with regression, and more. To paraphrase the great songwriter Paul Simon, there must be 50 ways to view your correlation! But don't
A previous article discussed the mathematical properties of the singular value decomposition (SVD) and showed how to use the SVD subroutine in SAS/IML software. This article uses the SVD to construct a low-rank approximation to an image. Applications include image compression and denoising an image. Construct a grayscale image The
The singular value decomposition (SVD) could be called the "billion-dollar algorithm" since it provides the mathematical basis for many modern algorithms in data science, including text mining, recommender systems (think Netflix and Amazon), image processing, and classification problems. Although the SVD was mathematically discovered in the late 1800s, computers have
All statisticians are familiar with the classical arithmetic mean. Some statisticians are also familiar with the geometric mean. Whereas the arithmetic mean of n numbers is the sum divided by n, the geometric mean of n nonnegative numbers is the n_th root of the product of the numbers. The geometric
When you implement a statistical algorithm in a vector-matrix language such as SAS/IML, R, or MATLAB, you should measure the performance of your implementation, which means that you should time how long a program takes to analyze data of varying sizes and characteristics. There are some general tips that can
Visualizing the correlations between variables often provides insight into the relationships between variables. I've previously written about how to use a heat map to visualize a correlation matrix in SAS/IML, and Chris Hemedinger showed how to use Base SAS to visualize correlations between variables. Recently a SAS programmer asked how
When someone refers to the correlation between two variables, they are probably referring to the Pearson correlation, which is the standard statistic that is taught in elementary statistics courses. Elementary courses do not usually mention that there are other measures of correlation. Why would anyone want a different estimate of
Recently, I was asked whether SAS can perform a principal component analysis (PCA) that is robust to the presence of outliers in the data. A PCA requires a data matrix, an estimate for the center of the data, and an estimate for the variance/covariance of the variables. Classically, these estimates
A SAS customer asked, "I computed the eigenvectors of a matrix in SAS and in another software package. I got different answers? How do I know which answer is correct?" I've been asked variations of this question dozens of times. The answer is usually "both answers are correct." The mathematical
Last week I blogged about the broken-stick problem in probability, which reminded me that the broken-stick model is one of the many techniques that have been proposed for choosing the number of principal components to retain during a principal component analysis. Recall that for a principal component analysis (PCA) of
A SAS user needed to convert a program from MATLAB into the SAS/IML matrix language and asked whether there is a SAS/IML equivalent to the fliplr and flipud functions in MATLAB. These functions flip the columns or rows (respectively) of a matrix; "LR" stands for "left-right" and "UD" stands for
A classical problem in elementary probability asks for the expected lengths of line segments that result from randomly selecting k points along a segment of unit length. It is both fun and instructive to simulate such problems. This article uses simulation in the SAS/IML language to estimate solutions to the
For a time series { y1, y2, ..., yN }, the difference operator computes the difference between two observations. The kth-order difference is the series { yk+1 - y1, ..., yN - yN-k }. In SAS, the DIF function in the DATA step computes differences between observations. The DIF function
Skewness is a measure of the asymmetry of a univariate distribution. I have previously shown how to compute the skewness for data distributions in SAS. The previous article computes Pearson's definition of skewness, which is based on the standardized third central moment of the data. Moment-based statistics are sensitive to
An important problem in machine learning is the "classification problem." In this supervised learning problem, you build a statistical model that predicts a set of categorical outcomes (responses) based on a set of input features (explanatory variables). You do this by training the model on data for which the outcomes
I recently showed how to compute a bootstrap percentile confidence interval in SAS. The percentile interval is a simple "first-order" interval that is formed from quantiles of the bootstrap distribution. However, it has two limitations. First, it does not use the estimate for the original data; it is based only
I previously wrote about how to compute a bootstrap confidence interval in Base SAS. As a reminder, the bootstrap method consists of the following steps: Compute the statistic of interest for the original data Resample B times from the data to form B bootstrap samples. B is usually a large
